CDS

Accession Number TCMCG083C11723
gbkey CDS
Protein Id KMZ67623.1
Location complement(join(13799..14324,14801..15021,15129..15203,15402..15518,17113..17205,19303..19461,19597..19734,19863..20009,20080..20391))
Organism Zostera marina
locus_tag ZOSMA_25G00060

Protein

Length 595aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA41721, BioSample:SAMN00991190
db_source LFYR01000889.1
Definition putative U2 splicing factor subunit [Zostera marina]
Locus_tag ZOSMA_25G00060

EGGNOG-MAPPER Annotation

COG_category A
Description zinc finger CCCH domain-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01001        [VIEW IN KEGG]
KEGG_ko ko:K08819        [VIEW IN KEGG]
EC 2.7.11.22        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
2.7.11.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0030628        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0036002        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0089701        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGTCGACGACAATGAGCAGGAAGGAAAAGAGGAAATCAATGAAGAAGCAGAAGAGAAAGCAGATACGAAAGGCGATTGCTGTCAAGGAGAGGACTGAAGAAGAATCCAGGAGAGACGACCCCGATGAGCAGCTGAAAGCAAGATTGAGAGAGATGGAGGAGGTTGAGGTATTTGAGAGGGAGATGAACAAGTTTGAGGAGAGGGAGAGGTTATTTCTCGAATCCGTTGCTACGAAAAAAGCTATGGAGACGGCAGAGGCAGAACAGAGGCAGAAGATGATTTCAGAAGAATTTGGAAATCGTGATAAGGATGATAAGAGCCCCGATGATGAAGATTGGGAATATGTAGAAGAGGGGCCGGCTGAGATCATTTGGAAAGATAATGAGATCATAGTCAAGAAGAAACGTATTAAAGTTCCCAAAAGGAGTGCCAATCAAGTTTTAACAAAGACAGAGGATGATGACAGGCCAACGTCAAATCCCCTACCTCCGCAGTCCACAGTTTTTTCTGATTACAACAACGAACCCCCTCTTTCGGCACATCAATTGTTGGAAAGTGTTGCCCAACAAACACCTAATTTTGGAACCGAACAGGATAAGGCTCACTGCCCCTTTCATCTGAAAACTGGAGTCTGTCGCTTTGGAGATCGTTGCAATAGGACTCATTTTTATGCTTCAAAATCATGCACATTGTTGATTAAGAACATGTACAGTGGCCCTGGCATATCCTGGGAGCAAGATGAGGAGCTTGAGCATACAGATGAAGAAATCGAGCAGTGTTATGAAGAGTTTTATGAAGATGTGCATACTGAGTTCTTGAAGTATGGTGAGATTGTTAATCTCAAGGTGTGCCGAAATGGTTCATTTCATCTCAGAGGAAATGTCTATGTGCATTACAAATCTTTTGAATCAGCAGAGCTCGCTCATAGCTCTATGAATGGACGCTATTTTGCTGGAAAACAGATTGTCTGTGAATTTGTGAGTGTCACTAGATGGAGGGTTGCTATTTGTGGCGAATATATGAAGTCAAGGTTAAAGACTTGCTCTCGTGGAAGTGCATGCAATTTCATTCATTGTTTCCGCAATCCTGGTGGTGATTATGAGTGGGCAGATTGGGATAACCCTCCTCCTAGACACTGGGTTAAAAAAATGATGGTTTTATTCGGTCATTCAGATGATTTGGAATCTCCCAAACATAGATATTTGGTTAATGGGGAATCACAAGAAAAGTTCAAAGAGAACACATATACTGATGAGAGAATTTATCCAGAATCCAGGCATGCAATCACTACTAACTCTGAGAAGGACAGCCATCTGCGAGATTATTCAAGGAGAAAACAAAGGAGAAGTCACAGTGAATGGGAACAATCTGATGATGAAGTTTATACAAATATTCATTATTCTGGCAAGAGGCACAGAAGAGGTGACTCTAGTGAATTCTCTTCTGAATACCAAGTACGACACCATAGCCGACGCCGGCATAGTACTCCTGATCACAGCAGAGTTTACAGAGATGATTGTTCAGAGCACAGTTATAAGAATTCCAGTAGATTCAATCATACCAATCTCTCTGGGGTAGATAAAGAATACAAAGAATCTAGCTCCCAAAAGCAACATTCTAGTTATTTCTCACATGAGGATCGACACATGAGAGACACATCTACAAAAAATAGACATGATAAGAACATCAATGTGAGTAGCAGCAGTAGAAGAGAGCATAGCAAAAAGAAGAGGAAGATCTCTGAAAATGGACATCCAGATCATGATCTCCATGATGCTTGTTAA
Protein:  
MMSTTMSRKEKRKSMKKQKRKQIRKAIAVKERTEEESRRDDPDEQLKARLREMEEVEVFEREMNKFEERERLFLESVATKKAMETAEAEQRQKMISEEFGNRDKDDKSPDDEDWEYVEEGPAEIIWKDNEIIVKKKRIKVPKRSANQVLTKTEDDDRPTSNPLPPQSTVFSDYNNEPPLSAHQLLESVAQQTPNFGTEQDKAHCPFHLKTGVCRFGDRCNRTHFYASKSCTLLIKNMYSGPGISWEQDEELEHTDEEIEQCYEEFYEDVHTEFLKYGEIVNLKVCRNGSFHLRGNVYVHYKSFESAELAHSSMNGRYFAGKQIVCEFVSVTRWRVAICGEYMKSRLKTCSRGSACNFIHCFRNPGGDYEWADWDNPPPRHWVKKMMVLFGHSDDLESPKHRYLVNGESQEKFKENTYTDERIYPESRHAITTNSEKDSHLRDYSRRKQRRSHSEWEQSDDEVYTNIHYSGKRHRRGDSSEFSSEYQVRHHSRRRHSTPDHSRVYRDDCSEHSYKNSSRFNHTNLSGVDKEYKESSSQKQHSSYFSHEDRHMRDTSTKNRHDKNINVSSSSRREHSKKKRKISENGHPDHDLHDAC